STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111217884Uncharacterized protein. (1573 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.659
CASK-2
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.659
UNC13C
Unc-13 homolog C.
    
 0.626
LOC111232095
Uncharacterized protein.
    
 0.626
LOC111229031
Unc-13 homolog A.
    
 0.626
ENSSDUP00000026716
Uncharacterized protein.
    
 0.626
ENSSDUP00000026759
C2 domain-containing protein.
    
 0.626
UNC13B
Unc-13 homolog B.
    
 0.626
LOC111238956
Uncharacterized protein.
    
 0.588
LOC111232323
Si:ch211-105f12.2.
    
 0.588
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.