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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtmr3Myotubularin related protein 3. (1268 aa)    
Predicted Functional Partners:
FIG4
FIG4 phosphoinositide 5-phosphatase.
     
 0.923
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.918
LOC111220862
SAC domain-containing protein.
   
 
 0.912
inpp4b
Inositol polyphosphate-4-phosphatase type II B.
   
 
 0.910
inpp5f
Inositol polyphosphate-5-phosphatase F.
     
 0.906
MTMR4
Myotubularin related protein 4.
  
  
 
0.904
ENSSDUP00000008486
Si:dkey-152b24.6.
     
  0.900
LOC111223493
Si:dkey-266f7.9.
     
  0.900
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
 0.770
pik3c2a
Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha; Belongs to the PI3/PI4-kinase family.
    
 0.751
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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