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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111218118G protein-coupled receptor 89B. (455 aa)    
Predicted Functional Partners:
OSBPL8
Oxysterol-binding protein; Belongs to the OSBP family.
 
      0.818
osbpl5
Oxysterol-binding protein; Belongs to the OSBP family.
 
      0.811
mysm1
Myb-like, SWIRM and MPN domains 1.
      
 0.695
gtpbp8
GTP binding protein 8 (putative).
   
  
 0.670
spryd4
SPRY domain containing 4.
      
 0.581
rer1
Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.
      
 0.570
wdr81
WD repeat domain 81.
      
 0.424
ugcg
UDP-glucose ceramide glucosyltransferase.
      
 0.418
gpha2
Glycoprotein hormones alpha chain; Belongs to the glycoprotein hormones subunit alpha family.
      
 0.418
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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