STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UNC13CUnc-13 homolog C. (2568 aa)    
Predicted Functional Partners:
ENSSDUP00000000294
PDZ domain-containing protein.
    
 0.996
RIMS2
Regulating synaptic membrane exocytosis 2.
    
0.996
ENSSDUP00000026759
C2 domain-containing protein.
 
      0.896
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 
 0.642
CASK-2
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 
 0.642
rims3
Regulating synaptic membrane exocytosis 3.
    
 0.626
LOC111217884
Uncharacterized protein.
    
 0.626
LOC111220678
Regulating synaptic membrane exocytosis 1a.
    
 0.626
ENSSDUP00000000245
C2 domain-containing protein.
    
 0.625
rims4
Regulating synaptic membrane exocytosis 4.
    
 0.583
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.