Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000006515Ig-like domain-containing protein. (121 aa)    
Predicted Functional Partners:
LOC111219871
Ig-like domain-containing protein.
   
 
 0.530
cd79a
CD79a molecule, immunoglobulin-associated alpha.
   
 
 0.511
ENSSDUP00000019337
Ig-like domain-containing protein.
  
 
0.446
ENSSDUP00000024223
Ig-like domain-containing protein.
  
 
0.443
ENSSDUP00000006437
Ig-like domain-containing protein.
  
  
 
0.419
ENSSDUP00000032367
Uncharacterized protein.
  
  0.419
ENSSDUP00000019405
IGv domain-containing protein.
  
  
 
0.408
ENSSDUP00000024242
Ig-like domain-containing protein.
  
  
 
0.406
ENSSDUP00000006505
Ig-like domain-containing protein.
  
  
 
0.405
ENSSDUP00000006531
Ig-like domain-containing protein.
  
  
 
0.405
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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