STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prebProlactin regulatory element binding. (415 aa)    
Predicted Functional Partners:
LOC111235254
Secretion associated, Ras related GTPase 1Ab; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.993
LOC111219959
Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.993
sar1b
Secretion associated, Ras related GTPase 1B; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.993
stx5
Syntaxin 5A; Belongs to the syntaxin family.
   
 
 0.843
LOC111237157
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.842
LOC111229204
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.842
MIA3
SH3 domain-containing protein.
    
 0.840
mia2
Uncharacterized protein.
    
 0.840
gosr2
Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
     
 0.833
LOC111232666
SEC24 homolog B, COPII coat complex component.
   
 
 0.809
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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