STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mblac1Metallo-beta-lactamase domain containing 1. (221 aa)    
Predicted Functional Partners:
traip
TRAF-interacting protein.
      
 0.580
TATDN3
TatD DNase domain containing 3.
      
 0.517
LOC111231733
TatD DNase domain containing 3.
      
 0.517
elac2
ElaC ribonuclease Z 2.
      
 0.477
ISYNA1
Inositol-3-phosphate synthase 1.
      
 0.467
fam214a
Family with sequence similarity 214 member A.
      
 0.450
kbtbd4
Kelch repeat and BTB (POZ) domain containing 4.
      
 0.426
ints9
Integrator complex subunit 9.
      
 0.410
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.