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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rab35RAB35, member RAS oncogene family b. (201 aa)    
Predicted Functional Partners:
dennd1a
DENN/MADD domain containing 1A.
    
 0.939
LOC111223760
Si:dkey-16l2.16.
  
  
 
0.901
anapc10
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.854
hspb11
Zgc:158640.
    
 0.854
LOC111229228
Si:dkey-76b14.2.
    
 0.832
ENSSDUP00000014111
DENN/MADD domain containing 1B.
    
 0.832
ift88
Intraflagellar transport 88 homolog.
    
 0.807
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.798
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.794
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
    
 0.785
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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