STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
catipCiliogenesis associated TTC17 interacting protein. (343 aa)    
Predicted Functional Partners:
tpgs1
Uncharacterized protein.
      
 0.665
gas2l1
Growth arrest-specific 2 like 1.
   
  0.655
ak8
Adenylate kinase 8.
   
  
 0.643
fopnl
Fgfr1op N-terminal like.
   
    0.610
ENSSDUP00000010962
Growth arrest-specific 2b.
   
  0.592
fbxl13
F-box and leucine-rich repeat protein 13.
   
  
 0.565
vwc2l
Von Willebrand factor C domain containing 2 like.
      
 0.559
aktip
Akt interacting protein.
   
    0.545
armc4
Armadillo repeat containing 4.
   
  
 0.511
ropn1l
Rhophilin associated tail protein 1-like.
   
  
 0.500
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.