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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cunh1orf198Si:ch73-111k22.2. (347 aa)    
Predicted Functional Partners:
LOC111229433
Cytochrome c oxidase subunit 7C.
   
 0.992
LOC111226642
Ubiquinol-cytochrome c reductase, complex III subunit VII.
   
 0.980
LOC111223538
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 0.980
LOC111234184
Ubiquinol-cytochrome c reductase, complex III subunit X.
   
 0.980
LOC111238283
Cytochrome c-1.
   
 0.978
COX5A
Cytochrome c oxidase subunit 5Ab.
   
 0.974
LOC111229626
Uncharacterized protein.
   
 0.974
COX2
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
   
 0.969
LOC111234724
Cytochrome c oxidase subunit 4I2.
   
 0.969
LOC111218574
Cytochrome c oxidase subunit 4I1.
   
 0.969
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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