STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGAP2ArfGAP with GTPase domain, ankyrin repeat and PH domain 2. (1039 aa)    
Predicted Functional Partners:
galnt2
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.558
styx
Serine/threonine/tyrosine interacting protein.
      
 0.558
slc6a2
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.558
hipk3
Homeodomain interacting protein kinase 3b.
      
 0.558
kif26b
Kinesin family member 26Ba; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.557
AMFR
Autocrine motility factor receptor b.
      
 0.557
gbgt1
Uncharacterized protein.
      
 0.557
tanc1
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1b.
    
 0.522
ell
Elongation factor RNA polymerase II.
      
 0.521
unc5b
Unc-5 netrin receptor B.
    
  0.520
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.