Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111218003 | LOC111228805 | ENSSDUP00000002877 | ENSSDUP00000011763 | Peroxiredoxin 2. | Peroxiredoxin 1. | 0.907 |
LOC111218003 | txndc5 | ENSSDUP00000002877 | ENSSDUP00000006949 | Peroxiredoxin 2. | Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family. | 0.686 |
LOC111222069 | LOC111231152 | ENSSDUP00000000032 | ENSSDUP00000014345 | Calreticulin. | Calreticulin. | 0.911 |
LOC111222069 | LOC111231847 | ENSSDUP00000000032 | ENSSDUP00000026545 | Calreticulin. | Calreticulin. | 0.911 |
LOC111222069 | hsp90b1 | ENSSDUP00000000032 | ENSSDUP00000030975 | Calreticulin. | Heat shock protein 90, beta (grp94), member 1. | 0.944 |
LOC111222069 | hspa5 | ENSSDUP00000000032 | ENSSDUP00000032656 | Calreticulin. | Heat shock protein 5; Belongs to the heat shock protein 70 family. | 0.897 |
LOC111222069 | txndc5 | ENSSDUP00000000032 | ENSSDUP00000006949 | Calreticulin. | Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family. | 0.691 |
LOC111228805 | LOC111218003 | ENSSDUP00000011763 | ENSSDUP00000002877 | Peroxiredoxin 1. | Peroxiredoxin 2. | 0.907 |
LOC111228805 | txndc5 | ENSSDUP00000011763 | ENSSDUP00000006949 | Peroxiredoxin 1. | Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family. | 0.686 |
LOC111231152 | LOC111222069 | ENSSDUP00000014345 | ENSSDUP00000000032 | Calreticulin. | Calreticulin. | 0.911 |
LOC111231152 | LOC111231847 | ENSSDUP00000014345 | ENSSDUP00000026545 | Calreticulin. | Calreticulin. | 0.901 |
LOC111231152 | hsp90b1 | ENSSDUP00000014345 | ENSSDUP00000030975 | Calreticulin. | Heat shock protein 90, beta (grp94), member 1. | 0.944 |
LOC111231152 | hspa5 | ENSSDUP00000014345 | ENSSDUP00000032656 | Calreticulin. | Heat shock protein 5; Belongs to the heat shock protein 70 family. | 0.897 |
LOC111231152 | txndc5 | ENSSDUP00000014345 | ENSSDUP00000006949 | Calreticulin. | Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family. | 0.691 |
LOC111231847 | LOC111222069 | ENSSDUP00000026545 | ENSSDUP00000000032 | Calreticulin. | Calreticulin. | 0.911 |
LOC111231847 | LOC111231152 | ENSSDUP00000026545 | ENSSDUP00000014345 | Calreticulin. | Calreticulin. | 0.901 |
LOC111231847 | hsp90b1 | ENSSDUP00000026545 | ENSSDUP00000030975 | Calreticulin. | Heat shock protein 90, beta (grp94), member 1. | 0.944 |
LOC111231847 | hspa5 | ENSSDUP00000026545 | ENSSDUP00000032656 | Calreticulin. | Heat shock protein 5; Belongs to the heat shock protein 70 family. | 0.897 |
LOC111231847 | txndc5 | ENSSDUP00000026545 | ENSSDUP00000006949 | Calreticulin. | Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family. | 0.691 |
LOC111234312 | txndc5 | ENSSDUP00000008593 | ENSSDUP00000006949 | Peroxiredoxin 4. | Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family. | 0.955 |
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