close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111217982Neuralized E3 ubiquitin protein ligase 1Aa. (590 aa)    
Predicted Functional Partners:
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.788
LOC111223453
Zinc and ring finger 2a.
      
 0.695
rapsn
Receptor-associated protein of the synapse, 43kD.
      
 0.663
mrpl15
Mitochondrial ribosomal protein L15.
      
 0.606
LOC111224398
TIP120 domain-containing protein.
     
 0.604
cand1
Cullin-associated and neddylation-dissociated 1.
     
 0.604
cunh21orf91
Zgc:110006.
      
 0.593
skp2
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
     
 0.580
ENSSDUP00000009213
GSAP-16 domain-containing protein.
   
 
 0.543
LOC111219998
NBR1 autophagy cargo receptor a.
   
 
 0.543
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.