STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fli1Fli-1 proto-oncogene, ETS transcription factor a. (458 aa)    
Predicted Functional Partners:
LOC111232758
Runt-related transcription factor.
   
 0.751
LOC111238387
Spi-1 proto-oncogene b.
   
 0.726
myb
V-myb avian myeloblastosis viral oncogene homolog.
     
 0.720
lmo2
LIM domain only 2 (rhombotin-like 1).
   
 
 0.624
runx2
Runt-related transcription factor.
   
 0.604
LOC111225344
Runt-related transcription factor.
   
 0.604
myl7
Myosin, light chain 7, regulatory.
      
 0.565
GATA2
GATA binding protein 2.
   
 0.563
LOC111221899
GATA binding protein 2a.
   
 0.563
LOC111221541
GATA binding protein 1a.
   
 0.542
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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