Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GATA2 | LOC111221541 | ENSSDUP00000010890 | ENSSDUP00000027282 | GATA binding protein 2. | GATA binding protein 1a. | 0.418 |
GATA2 | LOC111225344 | ENSSDUP00000010890 | ENSSDUP00000017860 | GATA binding protein 2. | Runt-related transcription factor. | 0.602 |
GATA2 | LOC111232758 | ENSSDUP00000010890 | ENSSDUP00000030029 | GATA binding protein 2. | Runt-related transcription factor. | 0.677 |
GATA2 | LOC111238387 | ENSSDUP00000010890 | ENSSDUP00000010903 | GATA binding protein 2. | Spi-1 proto-oncogene b. | 0.648 |
GATA2 | fli1 | ENSSDUP00000010890 | ENSSDUP00000007067 | GATA binding protein 2. | Fli-1 proto-oncogene, ETS transcription factor a. | 0.563 |
GATA2 | lmo2 | ENSSDUP00000010890 | ENSSDUP00000030499 | GATA binding protein 2. | LIM domain only 2 (rhombotin-like 1). | 0.691 |
GATA2 | myb | ENSSDUP00000010890 | ENSSDUP00000017710 | GATA binding protein 2. | V-myb avian myeloblastosis viral oncogene homolog. | 0.571 |
GATA2 | runx2 | ENSSDUP00000010890 | ENSSDUP00000010570 | GATA binding protein 2. | Runt-related transcription factor. | 0.602 |
LOC111221541 | GATA2 | ENSSDUP00000027282 | ENSSDUP00000010890 | GATA binding protein 1a. | GATA binding protein 2. | 0.418 |
LOC111221541 | LOC111221899 | ENSSDUP00000027282 | ENSSDUP00000030069 | GATA binding protein 1a. | GATA binding protein 2a. | 0.424 |
LOC111221541 | LOC111225344 | ENSSDUP00000027282 | ENSSDUP00000017860 | GATA binding protein 1a. | Runt-related transcription factor. | 0.534 |
LOC111221541 | LOC111232758 | ENSSDUP00000027282 | ENSSDUP00000030029 | GATA binding protein 1a. | Runt-related transcription factor. | 0.615 |
LOC111221541 | LOC111238387 | ENSSDUP00000027282 | ENSSDUP00000010903 | GATA binding protein 1a. | Spi-1 proto-oncogene b. | 0.553 |
LOC111221541 | fli1 | ENSSDUP00000027282 | ENSSDUP00000007067 | GATA binding protein 1a. | Fli-1 proto-oncogene, ETS transcription factor a. | 0.542 |
LOC111221541 | lmo2 | ENSSDUP00000027282 | ENSSDUP00000030499 | GATA binding protein 1a. | LIM domain only 2 (rhombotin-like 1). | 0.935 |
LOC111221541 | myb | ENSSDUP00000027282 | ENSSDUP00000017710 | GATA binding protein 1a. | V-myb avian myeloblastosis viral oncogene homolog. | 0.495 |
LOC111221541 | runx2 | ENSSDUP00000027282 | ENSSDUP00000010570 | GATA binding protein 1a. | Runt-related transcription factor. | 0.534 |
LOC111221899 | LOC111221541 | ENSSDUP00000030069 | ENSSDUP00000027282 | GATA binding protein 2a. | GATA binding protein 1a. | 0.424 |
LOC111221899 | LOC111225344 | ENSSDUP00000030069 | ENSSDUP00000017860 | GATA binding protein 2a. | Runt-related transcription factor. | 0.602 |
LOC111221899 | LOC111232758 | ENSSDUP00000030069 | ENSSDUP00000030029 | GATA binding protein 2a. | Runt-related transcription factor. | 0.677 |
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