close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111237777ARVCF delta catenin family member a. (793 aa)    
Predicted Functional Partners:
ctnna2
Catenin (cadherin-associated protein), alpha 2.
   
 0.501
ctnna1
Catenin (cadherin-associated protein), alpha 1.
   
 0.501
ENSSDUP00000008357
Uncharacterized protein.
   
 0.485
mettl3
Methyltransferase like 3; Belongs to the MT-A70-like family.
    
   0.451
ctnnal1
Catenin (cadherin-associated protein), alpha-like 1.
   
 0.442
LOC111219856
Vinculin b.
   
 0.442
LOC111234345
Vinculin a.
   
 0.442
glis2
GLIS family zinc finger 2b.
    
 
 0.437
vim
Vimentin like; Belongs to the intermediate filament family.
    
 
 0.429
SLC24A2
Solute carrier family 24 member 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.425
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.