STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
esr2Estrogen receptor 2b. (626 aa)    
Predicted Functional Partners:
pgr
Progesterone receptor.
   
0.818
nrip1
Nuclear receptor interacting protein 1b.
    
 0.810
sp1
Sp1 transcription factor.
    
 0.795
LOC111219918
E1A binding protein p300 a.
    
 0.764
LOC111230324
E1A binding protein p300 b.
    
 0.764
med1
Mediator complex subunit 1.
    
 0.761
brca1
Uncharacterized protein.
    
 
 0.693
CYP19A1
Cytochrome P450 family 19 subfamily A member 1; Belongs to the cytochrome P450 family.
    
 0.683
LOC111229253
CREB binding protein a.
    
 0.680
crebbp
CREB binding protein b.
    
 0.680
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.