Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111222844 | LOC111233879 | ENSSDUP00000027492 | ENSSDUP00000007327 | Macrophage stimulating 1 receptor a. | Uncharacterized protein. | 0.513 |
LOC111222844 | cdk5 | ENSSDUP00000027492 | ENSSDUP00000024088 | Macrophage stimulating 1 receptor a. | Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. | 0.674 |
LOC111222844 | met | ENSSDUP00000027492 | ENSSDUP00000022877 | Macrophage stimulating 1 receptor a. | MET proto-oncogene, receptor tyrosine kinase. | 0.704 |
LOC111222844 | mst1r | ENSSDUP00000027492 | ENSSDUP00000017581 | Macrophage stimulating 1 receptor a. | Macrophage stimulating 1 receptor b. | 0.701 |
LOC111233879 | LOC111222844 | ENSSDUP00000007327 | ENSSDUP00000027492 | Uncharacterized protein. | Macrophage stimulating 1 receptor a. | 0.513 |
LOC111233879 | amn | ENSSDUP00000007327 | ENSSDUP00000016951 | Uncharacterized protein. | Amnion associated transmembrane protein. | 0.635 |
LOC111233879 | cdk5 | ENSSDUP00000007327 | ENSSDUP00000024088 | Uncharacterized protein. | Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. | 0.422 |
LOC111233879 | met | ENSSDUP00000007327 | ENSSDUP00000022877 | Uncharacterized protein. | MET proto-oncogene, receptor tyrosine kinase. | 0.513 |
LOC111233879 | mst1r | ENSSDUP00000007327 | ENSSDUP00000017581 | Uncharacterized protein. | Macrophage stimulating 1 receptor b. | 0.513 |
amn | LOC111233879 | ENSSDUP00000016951 | ENSSDUP00000007327 | Amnion associated transmembrane protein. | Uncharacterized protein. | 0.635 |
cdk5 | LOC111222844 | ENSSDUP00000024088 | ENSSDUP00000027492 | Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. | Macrophage stimulating 1 receptor a. | 0.674 |
cdk5 | LOC111233879 | ENSSDUP00000024088 | ENSSDUP00000007327 | Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. | Uncharacterized protein. | 0.422 |
cdk5 | met | ENSSDUP00000024088 | ENSSDUP00000022877 | Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. | MET proto-oncogene, receptor tyrosine kinase. | 0.674 |
cdk5 | mst1r | ENSSDUP00000024088 | ENSSDUP00000017581 | Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. | Macrophage stimulating 1 receptor b. | 0.674 |
met | LOC111222844 | ENSSDUP00000022877 | ENSSDUP00000027492 | MET proto-oncogene, receptor tyrosine kinase. | Macrophage stimulating 1 receptor a. | 0.704 |
met | LOC111233879 | ENSSDUP00000022877 | ENSSDUP00000007327 | MET proto-oncogene, receptor tyrosine kinase. | Uncharacterized protein. | 0.513 |
met | cdk5 | ENSSDUP00000022877 | ENSSDUP00000024088 | MET proto-oncogene, receptor tyrosine kinase. | Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. | 0.674 |
met | mst1r | ENSSDUP00000022877 | ENSSDUP00000017581 | MET proto-oncogene, receptor tyrosine kinase. | Macrophage stimulating 1 receptor b. | 0.695 |
mst1r | LOC111222844 | ENSSDUP00000017581 | ENSSDUP00000027492 | Macrophage stimulating 1 receptor b. | Macrophage stimulating 1 receptor a. | 0.701 |
mst1r | LOC111233879 | ENSSDUP00000017581 | ENSSDUP00000007327 | Macrophage stimulating 1 receptor b. | Uncharacterized protein. | 0.513 |
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