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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111224227Cytochrome P450, family 26, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. (540 aa)    
Predicted Functional Partners:
LOC111216641
Cytochrome P450, family 3, subfamily A, polypeptide 65.
  
0.932
LOC111221785
Cytochrome P450, family 1, subfamily A; Belongs to the cytochrome P450 family.
  
 
 
0.921
aldh1a3
Aldehyde dehydrogenase 1 family, member A3; Belongs to the aldehyde dehydrogenase family.
   
 
 0.919
aldh1a2
Aldehyde dehydrogenase 1 family, member A2; Belongs to the aldehyde dehydrogenase family.
   
 
 0.919
ALDH1A1
Aldehyde dehydrogenase 1 family member A1; Belongs to the aldehyde dehydrogenase family.
   
 
 0.919
LOC111237093
Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.
  
0.912
LOC111233339
Cytochrome P450, family 26, subfamily b, polypeptide 1; Belongs to the cytochrome P450 family.
  
0.910
LOC111232312
Aldehyde oxidase 5.
   
 
 0.907
LOC111232447
Aldehyde oxidase 6.
   
 
 0.907
LOC111228806
UDPGT domain-containing protein; Belongs to the UDP-glycosyltransferase family.
   
 0.675
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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