close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111230007EF-hand domain-containing protein. (640 aa)    
Predicted Functional Partners:
Frmpd1
FERM and PDZ domain containing 1a.
      
 0.602
CHRNA9
Cholinergic receptor nicotinic alpha 9 subunit.
      
 0.585
LOC111226674
Germ cell nuclear acidic peptidase.
      
 0.577
LOC111223229
Uncharacterized protein.
      
0.491
LOC111239565
Guanylate kinase 1b.
    
 
 0.480
ENSSDUP00000018221
Uncharacterized protein.
  
  0.479
guk1
Guanylate kinase 1a.
    
 
 0.475
uspl1
Ubiquitin specific peptidase like 1.
  
 
  0.451
LOC111220614
Dishevelled-binding antagonist of beta-catenin 2.
  
     0.444
wdr18
WD repeat domain 18.
   
 0.443
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: medium (46%) [HD]