Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSDUP00000009098 | ENSSDUP00000033101 | ENSSDUP00000009098 | ENSSDUP00000033101 | Uncharacterized protein. | Uncharacterized protein. | 0.402 |
ENSSDUP00000009098 | aff4 | ENSSDUP00000009098 | ENSSDUP00000026931 | Uncharacterized protein. | AF4/FMR2 family, member 4. | 0.479 |
ENSSDUP00000009098 | ccnt1 | ENSSDUP00000009098 | ENSSDUP00000007497 | Uncharacterized protein. | Cyclin T1; Belongs to the cyclin family. | 0.721 |
ENSSDUP00000009098 | cdk9 | ENSSDUP00000009098 | ENSSDUP00000025736 | Uncharacterized protein. | Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. | 0.879 |
ENSSDUP00000009098 | larp7 | ENSSDUP00000009098 | ENSSDUP00000009600 | Uncharacterized protein. | La ribonucleoprotein domain family, member 7. | 0.779 |
ENSSDUP00000033101 | ENSSDUP00000009098 | ENSSDUP00000033101 | ENSSDUP00000009098 | Uncharacterized protein. | Uncharacterized protein. | 0.402 |
ENSSDUP00000033101 | aff4 | ENSSDUP00000033101 | ENSSDUP00000026931 | Uncharacterized protein. | AF4/FMR2 family, member 4. | 0.712 |
ENSSDUP00000033101 | ccnt1 | ENSSDUP00000033101 | ENSSDUP00000007497 | Uncharacterized protein. | Cyclin T1; Belongs to the cyclin family. | 0.829 |
ENSSDUP00000033101 | cdk9 | ENSSDUP00000033101 | ENSSDUP00000025736 | Uncharacterized protein. | Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. | 0.963 |
ENSSDUP00000033101 | larp7 | ENSSDUP00000033101 | ENSSDUP00000009600 | Uncharacterized protein. | La ribonucleoprotein domain family, member 7. | 0.534 |
ENSSDUP00000033101 | nelfe | ENSSDUP00000033101 | ENSSDUP00000027751 | Uncharacterized protein. | Negative elongation factor complex member E. | 0.670 |
ENSSDUP00000033101 | supt4h1 | ENSSDUP00000033101 | ENSSDUP00000024274 | Uncharacterized protein. | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | 0.625 |
ENSSDUP00000033101 | supt5h | ENSSDUP00000033101 | ENSSDUP00000020019 | Uncharacterized protein. | Transcription elongation factor SPT5. | 0.690 |
aff4 | ENSSDUP00000009098 | ENSSDUP00000026931 | ENSSDUP00000009098 | AF4/FMR2 family, member 4. | Uncharacterized protein. | 0.479 |
aff4 | ENSSDUP00000033101 | ENSSDUP00000026931 | ENSSDUP00000033101 | AF4/FMR2 family, member 4. | Uncharacterized protein. | 0.712 |
aff4 | ccnt1 | ENSSDUP00000026931 | ENSSDUP00000007497 | AF4/FMR2 family, member 4. | Cyclin T1; Belongs to the cyclin family. | 0.932 |
aff4 | cdk9 | ENSSDUP00000026931 | ENSSDUP00000025736 | AF4/FMR2 family, member 4. | Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. | 0.983 |
aff4 | larp7 | ENSSDUP00000026931 | ENSSDUP00000009600 | AF4/FMR2 family, member 4. | La ribonucleoprotein domain family, member 7. | 0.604 |
aff4 | nelfe | ENSSDUP00000026931 | ENSSDUP00000027751 | AF4/FMR2 family, member 4. | Negative elongation factor complex member E. | 0.726 |
aff4 | supt4h1 | ENSSDUP00000026931 | ENSSDUP00000024274 | AF4/FMR2 family, member 4. | Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. | 0.663 |
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