Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wdr89WD repeat domain 89. (378 aa)    
Predicted Functional Partners:
nol8
Nucleolar protein 8.
    
   0.921
sdad1
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
    0.627
gphb5
Glycoprotein hormone subunit beta 5.
      
 0.623
Tnfaip8l3
Tumor necrosis factor, alpha-induced protein 8-like 3.
      
 0.618
wdr43
WD repeat domain 43.
   
    0.611
ttc17
Tetratricopeptide repeat domain 17.
      
 0.599
rpl10a
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
   0.589
fance
FA complementation group E.
   
   0.589
cdpf1
Cysteine rich DPF motif domain containing 1.
      
 0.555
dnlz
DNL-type domain-containing protein.
      
 0.555
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.