rpgr protein (Seriola dumerili) - STRING interaction network

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Predicted Interactions

gene neighborhood

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textmining

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Score

rpgr

Uncharacterized protein. (1893 aa)

Predicted Functional Partners:

LOC111231306

0.930

ran

0.901

adgrd1

0.901

pde6d

0.893

LOC111218510

0.871

ranbp1

0.776

LOC111233737

0.707

LOC111230311

0.700

LOC111219898

0.700

kpnb1

0.650

Your Current Organism:

Seriola dumerili

NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111218510	LOC111219898	ENSSDUP00000018015	ENSSDUP00000010806	RAN binding protein 2.	Ran GTPase activating protein 1b.	0.999
LOC111218510	LOC111230311	ENSSDUP00000018015	ENSSDUP00000000195	RAN binding protein 2.	RAN GTPase activating protein 1a.	0.997
LOC111218510	adgrd1	ENSSDUP00000018015	ENSSDUP00000031584	RAN binding protein 2.	Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family.	0.983
LOC111218510	kpnb1	ENSSDUP00000018015	ENSSDUP00000022282	RAN binding protein 2.	Karyopherin (importin) beta 1.	0.959
LOC111218510	ran	ENSSDUP00000018015	ENSSDUP00000020401	RAN binding protein 2.	GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.983
LOC111218510	ranbp1	ENSSDUP00000018015	ENSSDUP00000003127	RAN binding protein 2.	RAN binding protein 1.	0.544
LOC111218510	rpgr	ENSSDUP00000018015	ENSSDUP00000007627	RAN binding protein 2.	Uncharacterized protein.	0.871
LOC111219898	LOC111218510	ENSSDUP00000010806	ENSSDUP00000018015	Ran GTPase activating protein 1b.	RAN binding protein 2.	0.999
LOC111219898	adgrd1	ENSSDUP00000010806	ENSSDUP00000031584	Ran GTPase activating protein 1b.	Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family.	0.941
LOC111219898	kpnb1	ENSSDUP00000010806	ENSSDUP00000022282	Ran GTPase activating protein 1b.	Karyopherin (importin) beta 1.	0.742
LOC111219898	ran	ENSSDUP00000010806	ENSSDUP00000020401	Ran GTPase activating protein 1b.	GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.941
LOC111219898	ranbp1	ENSSDUP00000010806	ENSSDUP00000003127	Ran GTPase activating protein 1b.	RAN binding protein 1.	0.969
LOC111219898	rpgr	ENSSDUP00000010806	ENSSDUP00000007627	Ran GTPase activating protein 1b.	Uncharacterized protein.	0.700
LOC111230311	LOC111218510	ENSSDUP00000000195	ENSSDUP00000018015	RAN GTPase activating protein 1a.	RAN binding protein 2.	0.997
LOC111230311	adgrd1	ENSSDUP00000000195	ENSSDUP00000031584	RAN GTPase activating protein 1a.	Adhesion G protein-coupled receptor D1; Belongs to the G-protein coupled receptor 2 family.	0.941
LOC111230311	kpnb1	ENSSDUP00000000195	ENSSDUP00000022282	RAN GTPase activating protein 1a.	Karyopherin (importin) beta 1.	0.742
LOC111230311	ran	ENSSDUP00000000195	ENSSDUP00000020401	RAN GTPase activating protein 1a.	GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.941
LOC111230311	ranbp1	ENSSDUP00000000195	ENSSDUP00000003127	RAN GTPase activating protein 1a.	RAN binding protein 1.	0.969
LOC111230311	rpgr	ENSSDUP00000000195	ENSSDUP00000007627	RAN GTPase activating protein 1a.	Uncharacterized protein.	0.700
LOC111231306	pde6d	ENSSDUP00000030153	ENSSDUP00000013338	RPGR interacting protein 1.	Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...]	0.478