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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tra2aTransformer 2 alpha homolog. (303 aa)    
Predicted Functional Partners:
SRSF3
Serine and arginine rich splicing factor 3b.
   
 0.860
LOC111222859
RRM domain-containing protein.
   
 0.860
LOC111234408
Uncharacterized protein.
  
0.816
LOC111216940
Serine and arginine rich splicing factor 7a.
   
0.814
srsf7
Serine and arginine rich splicing factor 7b.
   
 0.814
ENSSDUP00000005354
RRM domain-containing protein.
   
 0.800
LOC111232243
Serine and arginine rich splicing factor 1a.
   
 0.800
LOC111230261
RRM domain-containing protein.
  
0.784
LOC111219724
Serine and arginine rich splicing factor 2a.
  
0.783
LOC111234256
Serine and arginine rich splicing factor 9.
   
 0.774
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.