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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111238884Si:dkey-202g17.3. (523 aa)    
Predicted Functional Partners:
LOC111224558
Si:ch73-352p4.8.
   
 0.985
slc7a11
Solute carrier family 7 member 11.
   
 0.985
slc7a5
Solute carrier family 7 member 5.
   
 0.976
LOC111219058
Uncharacterized protein.
   
 0.972
LOC111237169
Solute carrier family 3 member 2b.
     
 
0.900
slc3a2
Solute carrier family 3 member 2a.
     
 
0.900
gbe1
Glucan (1,4-alpha-), branching enzyme 1b.
  
 
 0.755
LOC111235616
Solute carrier family 7 member 8a.
   
 0.737
LOC111220304
Solute carrier family 7 member 10a.
   
 0.737
LOC111223800
Solute carrier family 7 member 8b.
   
 0.737
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.