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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
maxMyc associated factor X. (177 aa)    
Predicted Functional Partners:
mxd1
MAX dimerization protein 1.
    
 
 0.915
LOC111239398
MYCN proto-oncogene, bHLH transcription factor.
    
0.889
ENSSDUP00000012120
BHLH domain-containing protein.
    
 0.878
Mga
Uncharacterized protein.
    
 0.878
myc
Transcriptional regulator; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes.
    
 
0.863
mxi1
Max interactor 1, dimerization protein.
   
 
 0.846
LOC111235286
MAX interactor 1, dimerization protein.
   
 
 0.846
rnf2
Ring finger protein 2.
    
 0.737
tfdp1
Transcription factor.
    
  0.724
mnt
MAX network transcriptional repressor a.
    
 
 0.720
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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