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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000007809Chemokine (C-C motif) receptor 10; Belongs to the G-protein coupled receptor 1 family. (388 aa)    
Predicted Functional Partners:
LOC111227989
SCY domain-containing protein.
   
 0.961
ccr7
Chemokine (C-C motif) receptor 7; Belongs to the G-protein coupled receptor 1 family.
     
0.938
LOC111229327
Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.656
LOC111234130
Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1).
    
 0.656
LOC111231462
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.630
LOC111230068
CD4-1 molecule.
    
 0.629
cxcr5
Chemokine (C-X-C motif) receptor 5; Belongs to the G-protein coupled receptor 1 family.
     
0.599
LOC111225694
Chemokine (C-C motif) receptor 6b; Belongs to the G-protein coupled receptor 1 family.
     
0.589
cxcl13
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
     
 0.580
LOC111227909
Chemokine (C-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family.
     
0.578
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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