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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111228210Mitochondrial calcium uniporter regulator 1. (312 aa)    
Predicted Functional Partners:
micu1
Mitochondrial calcium uptake 1.
      
 0.663
micu2
Mitochondrial calcium uptake 2.
      
 0.654
ENSSDUP00000014393
Uncharacterized protein.
      
 0.471
LOC111226773
Mitochondrial calcium uptake family, member 3b.
      
 0.471
fam32a
Family with sequence similarity 32 member A.
   
  
 0.436
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
    
 
 0.402
mcu
Mitochondrial calcium uniporter.
    
 
 0.402
LOC111237517
MCU domain-containing protein.
    
 
 0.402
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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