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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zbtb33Zinc finger and BTB domain containing 33. (636 aa)    
Predicted Functional Partners:
ARVCF
ARVCF delta catenin family member b.
    
 
 0.695
CTNND1
Catenin delta 1.
    
 
 0.695
LOC111229198
Catenin (cadherin-associated protein), delta 1.
    
 
 0.695
LOC111237263
Catenin (cadherin-associated protein), delta 2a.
    
 
 0.593
ctnnd2
Catenin (cadherin-associated protein), delta 2b.
    
 
 0.593
PKP4
Plakophilin 4.
    
 
 0.593
mecp2
Methyl CpG binding protein 2.
  
 
 0.591
LOC111230941
cAMP responsive element binding protein 3-like 3 like.
     
 0.543
LOC111233272
Uncharacterized protein.
    
 
 0.499
ncor1
Nuclear receptor corepressor 1.
    
 0.490
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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