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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000007838Uncharacterized protein. (594 aa)    
Predicted Functional Partners:
SLC39A11
Solute carrier family 39 member 11.
   
 0.583
LOC111233248
Solute carrier family 39 member 7.
  
 0.542
LOC111225195
Metallothionein; Metallothioneins have a high content of cysteine residues that bind various heavy metals.
      
 0.513
slc30a6
Solute carrier family 30 member 6.
    
 
 0.512
atp7a
ATPase copper transporting alpha.
  
  
 0.510
atp7b
ATPase copper transporting beta.
  
  
 0.510
LOC111225479
Solute carrier family 39 member 8.
  
 0.498
slc30a9
Solute carrier family 30 member 9.
  
 
 0.493
slc39a13
Solute carrier family 39 member 13.
   
 0.492
LOC111227344
Solute carrier family 39 member 14.
  
 0.491
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.