Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sacsSacsin molecular chaperone. (4580 aa)    
Predicted Functional Partners:
apaf1
Apoptotic peptidase activating factor 1.
   
 0.788
incenp
Uncharacterized protein.
   
 0.720
LOC111232562
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 0.719
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.719
gak
Cyclin G associated kinase.
   
 0.702
UBE3A
Ubiquitin protein ligase E3A.
    
 
 0.672
LOC111238452
HECT domain-containing protein.
    
 
 0.657
ENSSDUP00000032578
Si:ch211-272n13.3.
   
 
 0.656
LOC111222733
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.639
LOC111218544
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.639
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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