STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neurl2Neuralized E3 ubiquitin protein ligase 2. (275 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog a; Belongs to the SKP1 family.
     
 0.695
LOC111224398
TIP120 domain-containing protein.
     
 0.625
cand1
Cullin-associated and neddylation-dissociated 1.
     
 0.625
LOC111216894
CULLIN_2 domain-containing protein; Belongs to the cullin family.
     
 0.620
CUL5
Cullin 5; Belongs to the cullin family.
     
 0.620
ccdc22
Coiled-coil domain containing 22.
     
 0.610
LOC111235685
NEDD8 ubiquitin like modifier.
    
  0.588
LOC111223799
Ubiquitin-like domain-containing protein.
    
  0.588
LOC111217678
Elongin B.
     
 0.550
ELOB
Elongin B.
     
 0.550
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.