Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSDUP00000028854 | ccndbp1 | ENSSDUP00000028854 | ENSSDUP00000008402 | Uncharacterized protein. | Cyclin D-type binding-protein 1. | 0.470 |
ENSSDUP00000028854 | mrpl55 | ENSSDUP00000028854 | ENSSDUP00000031367 | Uncharacterized protein. | Zgc:171480. | 0.603 |
LOC111235891 | ccndbp1 | ENSSDUP00000016754 | ENSSDUP00000008402 | GRB2 related adaptor protein 2b. | Cyclin D-type binding-protein 1. | 0.468 |
aasdh | ccndbp1 | ENSSDUP00000031671 | ENSSDUP00000008402 | Aminoadipate-semialdehyde dehydrogenase. | Cyclin D-type binding-protein 1. | 0.614 |
aasdh | ndufab1 | ENSSDUP00000031671 | ENSSDUP00000020880 | Aminoadipate-semialdehyde dehydrogenase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.999 |
bard1 | ccndbp1 | ENSSDUP00000019914 | ENSSDUP00000008402 | BRCA1 associated RING domain 1. | Cyclin D-type binding-protein 1. | 0.516 |
bard1 | mre11 | ENSSDUP00000019914 | ENSSDUP00000029727 | BRCA1 associated RING domain 1. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.980 |
bard1 | ndufab1 | ENSSDUP00000019914 | ENSSDUP00000020880 | BRCA1 associated RING domain 1. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.976 |
ccndbp1 | ENSSDUP00000028854 | ENSSDUP00000008402 | ENSSDUP00000028854 | Cyclin D-type binding-protein 1. | Uncharacterized protein. | 0.470 |
ccndbp1 | LOC111235891 | ENSSDUP00000008402 | ENSSDUP00000016754 | Cyclin D-type binding-protein 1. | GRB2 related adaptor protein 2b. | 0.468 |
ccndbp1 | aasdh | ENSSDUP00000008402 | ENSSDUP00000031671 | Cyclin D-type binding-protein 1. | Aminoadipate-semialdehyde dehydrogenase. | 0.614 |
ccndbp1 | bard1 | ENSSDUP00000008402 | ENSSDUP00000019914 | Cyclin D-type binding-protein 1. | BRCA1 associated RING domain 1. | 0.516 |
ccndbp1 | grap2 | ENSSDUP00000008402 | ENSSDUP00000032312 | Cyclin D-type binding-protein 1. | GRB2 related adaptor protein 2a. | 0.468 |
ccndbp1 | mre11 | ENSSDUP00000008402 | ENSSDUP00000029727 | Cyclin D-type binding-protein 1. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.463 |
ccndbp1 | mrpl55 | ENSSDUP00000008402 | ENSSDUP00000031367 | Cyclin D-type binding-protein 1. | Zgc:171480. | 0.569 |
ccndbp1 | ndufab1 | ENSSDUP00000008402 | ENSSDUP00000020880 | Cyclin D-type binding-protein 1. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.545 |
ccndbp1 | syf2 | ENSSDUP00000008402 | ENSSDUP00000017896 | Cyclin D-type binding-protein 1. | SYF2 pre-mRNA-splicing factor. | 0.646 |
ccndbp1 | tfpt | ENSSDUP00000008402 | ENSSDUP00000011162 | Cyclin D-type binding-protein 1. | TCF3 (E2A) fusion partner. | 0.492 |
grap2 | ccndbp1 | ENSSDUP00000032312 | ENSSDUP00000008402 | GRB2 related adaptor protein 2a. | Cyclin D-type binding-protein 1. | 0.468 |
mre11 | bard1 | ENSSDUP00000029727 | ENSSDUP00000019914 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | BRCA1 associated RING domain 1. | 0.980 |
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