STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adarAdenosine deaminase RNA specific. (1387 aa)    
Predicted Functional Partners:
dicer1
Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily.
    
 0.696
znfx1
Zinc finger, NFX1-type containing 1.
   
  
 0.661
ada
Adenosine deaminase.
      
 0.653
dhx9
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 
 0.638
asns
Asparagine synthetase [glutamine-hydrolyzing].
   
  
 0.607
ifih1
Interferon induced with helicase C domain 1.
   
  
 0.590
ENSSDUP00000003789
Eukaryotic translation initiation factor 2-alpha kinase 2.
   
 
0.542
ENSSDUP00000003865
Uncharacterized protein.
   
 
0.542
ENSSDUP00000003898
Uncharacterized protein.
   
 
0.542
drosha
Drosha ribonuclease III.
    
 0.511
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.