Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSDUP00000017303 | LOC111218131 | ENSSDUP00000017303 | ENSSDUP00000019481 | Uncharacterized protein. | Myosin, light chain 1, alkali; skeletal, fast. | 0.892 |
ENSSDUP00000017303 | LOC111219734 | ENSSDUP00000017303 | ENSSDUP00000031879 | Uncharacterized protein. | Myosin light chain, phosphorylatable, fast skeletal muscle b. | 0.442 |
ENSSDUP00000017303 | LOC111225060 | ENSSDUP00000017303 | ENSSDUP00000008476 | Uncharacterized protein. | Leiomodin 2 (cardiac) b. | 0.440 |
ENSSDUP00000017303 | mylpf | ENSSDUP00000017303 | ENSSDUP00000030718 | Uncharacterized protein. | Myosin light chain, phosphorylatable, fast skeletal muscle a. | 0.442 |
ENSSDUP00000017303 | nrap | ENSSDUP00000017303 | ENSSDUP00000030439 | Uncharacterized protein. | Nebulin-related anchoring protein. | 0.411 |
LOC111218131 | ENSSDUP00000017303 | ENSSDUP00000019481 | ENSSDUP00000017303 | Myosin, light chain 1, alkali; skeletal, fast. | Uncharacterized protein. | 0.892 |
LOC111218131 | LOC111219734 | ENSSDUP00000019481 | ENSSDUP00000031879 | Myosin, light chain 1, alkali; skeletal, fast. | Myosin light chain, phosphorylatable, fast skeletal muscle b. | 0.963 |
LOC111218131 | LOC111225060 | ENSSDUP00000019481 | ENSSDUP00000008476 | Myosin, light chain 1, alkali; skeletal, fast. | Leiomodin 2 (cardiac) b. | 0.545 |
LOC111218131 | LOC111231482 | ENSSDUP00000019481 | ENSSDUP00000003729 | Myosin, light chain 1, alkali; skeletal, fast. | Myozenin 2b. | 0.437 |
LOC111218131 | LOC111231594 | ENSSDUP00000019481 | ENSSDUP00000010430 | Myosin, light chain 1, alkali; skeletal, fast. | Myozenin 2a. | 0.437 |
LOC111218131 | csrp3 | ENSSDUP00000019481 | ENSSDUP00000022465 | Myosin, light chain 1, alkali; skeletal, fast. | Cysteine and glycine-rich protein 3 (cardiac LIM protein). | 0.428 |
LOC111218131 | mylpf | ENSSDUP00000019481 | ENSSDUP00000030718 | Myosin, light chain 1, alkali; skeletal, fast. | Myosin light chain, phosphorylatable, fast skeletal muscle a. | 0.963 |
LOC111218131 | neb | ENSSDUP00000019481 | ENSSDUP00000017242 | Myosin, light chain 1, alkali; skeletal, fast. | Nebulin. | 0.892 |
LOC111218131 | nrap | ENSSDUP00000019481 | ENSSDUP00000030439 | Myosin, light chain 1, alkali; skeletal, fast. | Nebulin-related anchoring protein. | 0.486 |
LOC111219734 | ENSSDUP00000017303 | ENSSDUP00000031879 | ENSSDUP00000017303 | Myosin light chain, phosphorylatable, fast skeletal muscle b. | Uncharacterized protein. | 0.442 |
LOC111219734 | LOC111218131 | ENSSDUP00000031879 | ENSSDUP00000019481 | Myosin light chain, phosphorylatable, fast skeletal muscle b. | Myosin, light chain 1, alkali; skeletal, fast. | 0.963 |
LOC111219734 | LOC111225060 | ENSSDUP00000031879 | ENSSDUP00000008476 | Myosin light chain, phosphorylatable, fast skeletal muscle b. | Leiomodin 2 (cardiac) b. | 0.411 |
LOC111219734 | csrp3 | ENSSDUP00000031879 | ENSSDUP00000022465 | Myosin light chain, phosphorylatable, fast skeletal muscle b. | Cysteine and glycine-rich protein 3 (cardiac LIM protein). | 0.580 |
LOC111219734 | neb | ENSSDUP00000031879 | ENSSDUP00000017242 | Myosin light chain, phosphorylatable, fast skeletal muscle b. | Nebulin. | 0.442 |
LOC111225060 | ENSSDUP00000017303 | ENSSDUP00000008476 | ENSSDUP00000017303 | Leiomodin 2 (cardiac) b. | Uncharacterized protein. | 0.440 |
page 1 of 4