STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111231262Leukotriene B4 receptor 2b. (360 aa)    
Predicted Functional Partners:
LOC111232216
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
    
  0.797
LOC111232198
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.746
LOC111230822
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.746
LOC111230911
Uncharacterized protein.
    
 0.746
LOC111239871
Guanine nucleotide binding protein (G protein), alpha 14.
   
  0.742
LOC111239870
Uncharacterized protein.
    
  0.707
ptger3
Prostaglandin E receptor 3 (subtype EP3).
      
 0.416
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.