STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000008822Uncharacterized protein. (393 aa)    
Predicted Functional Partners:
plk4
Polo-like kinase 4 (Drosophila).
    
 0.968
haus6
HAUS augmin-like complex, subunit 6.
   
 
 0.788
seh1l
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
 
 
  
 0.770
plk2
Serine/threonine-protein kinase PLK.
    
 0.725
PLK1
Serine/threonine-protein kinase PLK.
    
 0.725
plk3
Serine/threonine-protein kinase PLK.
    
 0.725
LOC111232562
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 0.702
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.702
ruvbl1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.666
bora
Bora aurora kinase A activator.
   
 
 0.666
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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