STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSDUP00000009122KIND domain-containing protein. (213 aa)    
Predicted Functional Partners:
ENSSDUP00000031945
Uncharacterized protein.
 
  
  0.699
plekha2
Si:ch211-204d2.4.
    
 0.598
LOC111234286
Rap guanine nucleotide exchange factor (GEF) 6.
    
 0.577
rapgef2
Rap guanine nucleotide exchange factor (GEF) 2.
    
 
 0.563
apc2
APC regulator of WNT signaling pathway 2.
   
 
 0.523
ENSSDUP00000030486
APC_N_CC domain-containing protein.
   
 
 0.523
LOC111235178
Uncharacterized protein.
   
 
 0.508
ENSSDUP00000031942
Uncharacterized protein.
 
      0.505
pick1
Protein interacting with prkca 1.
    
 0.471
LOC111233334
PH domain-containing protein.
    
 0.465
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.