STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam133bFamily with sequence similarity 133 member B. (265 aa)    
Predicted Functional Partners:
thoc7
THO complex 7.
      
 0.538
ccdc174
Coiled-coil domain containing 174.
   
    0.473
rab3gap2
RAB3 GTPase activating protein subunit 2 (non-catalytic).
      
 0.465
thoc3
THO complex 3.
      
 0.436
ENSSDUP00000000912
Uncharacterized protein.
      
 0.426
ENSSDUP00000005894
Uncharacterized protein.
      
 0.426
cunh3orf70
Zgc:162707.
      
 0.426
knop1
Lysine-rich nucleolar protein 1.
      
 0.422
thoc6
THO complex 6.
      
 0.418
poldip3
Polymerase (DNA-directed), delta interacting protein 3.
      
 0.418
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.