Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSDUP00000031152 | mrpl12 | ENSSDUP00000031152 | ENSSDUP00000019993 | FAM194 domain-containing protein. | Mitochondrial ribosomal protein L12. | 0.975 |
ENSSDUP00000031152 | mrpl19 | ENSSDUP00000031152 | ENSSDUP00000000492 | FAM194 domain-containing protein. | Mitochondrial ribosomal protein L19. | 0.989 |
ENSSDUP00000031152 | mrpl20 | ENSSDUP00000031152 | ENSSDUP00000011868 | FAM194 domain-containing protein. | Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family. | 0.989 |
ENSSDUP00000031152 | mrpl21 | ENSSDUP00000031152 | ENSSDUP00000001952 | FAM194 domain-containing protein. | Uncharacterized protein. | 0.991 |
ENSSDUP00000031152 | mrps16 | ENSSDUP00000031152 | ENSSDUP00000020858 | FAM194 domain-containing protein. | Mitochondrial ribosomal protein S16. | 0.991 |
ENSSDUP00000031152 | mrps9 | ENSSDUP00000031152 | ENSSDUP00000015404 | FAM194 domain-containing protein. | Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.978 |
ENSSDUP00000031152 | mrrf | ENSSDUP00000031152 | ENSSDUP00000022245 | FAM194 domain-containing protein. | Mitochondrial ribosome recycling factor. | 0.625 |
ENSSDUP00000031152 | pdcd11 | ENSSDUP00000031152 | ENSSDUP00000029623 | FAM194 domain-containing protein. | Programmed cell death 11. | 0.960 |
ENSSDUP00000031152 | tsfm | ENSSDUP00000031152 | ENSSDUP00000009346 | FAM194 domain-containing protein. | Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.996 |
mrpl12 | ENSSDUP00000031152 | ENSSDUP00000019993 | ENSSDUP00000031152 | Mitochondrial ribosomal protein L12. | FAM194 domain-containing protein. | 0.975 |
mrpl12 | mrpl19 | ENSSDUP00000019993 | ENSSDUP00000000492 | Mitochondrial ribosomal protein L12. | Mitochondrial ribosomal protein L19. | 0.999 |
mrpl12 | mrpl20 | ENSSDUP00000019993 | ENSSDUP00000011868 | Mitochondrial ribosomal protein L12. | Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family. | 0.999 |
mrpl12 | mrpl21 | ENSSDUP00000019993 | ENSSDUP00000001952 | Mitochondrial ribosomal protein L12. | Uncharacterized protein. | 0.999 |
mrpl12 | mrps16 | ENSSDUP00000019993 | ENSSDUP00000020858 | Mitochondrial ribosomal protein L12. | Mitochondrial ribosomal protein S16. | 0.999 |
mrpl12 | mrps9 | ENSSDUP00000019993 | ENSSDUP00000015404 | Mitochondrial ribosomal protein L12. | Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
mrpl12 | mrrf | ENSSDUP00000019993 | ENSSDUP00000022245 | Mitochondrial ribosomal protein L12. | Mitochondrial ribosome recycling factor. | 0.962 |
mrpl12 | pdcd11 | ENSSDUP00000019993 | ENSSDUP00000029623 | Mitochondrial ribosomal protein L12. | Programmed cell death 11. | 0.984 |
mrpl12 | tsfm | ENSSDUP00000019993 | ENSSDUP00000009346 | Mitochondrial ribosomal protein L12. | Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.978 |
mrpl12 | tufm | ENSSDUP00000019993 | ENSSDUP00000023300 | Mitochondrial ribosomal protein L12. | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.978 |
mrpl19 | ENSSDUP00000031152 | ENSSDUP00000000492 | ENSSDUP00000031152 | Mitochondrial ribosomal protein L19. | FAM194 domain-containing protein. | 0.989 |
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