STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111216424Calmodulin. (149 aa)    
Predicted Functional Partners:
eef2k
Eukaryotic elongation factor 2 kinase.
    
 
 0.766
LOC111230114
Transient receptor potential cation channel, subfamily V, member 6; Belongs to the transient receptor (TC 1.A.4) family.
    
 
 0.763
LOC111223622
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.745
LOC111227336
Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 2; Belongs to the protein kinase superfamily.
   
 0.745
LOC111231374
Calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2.
   
 0.745
camk2a
Calcium/calmodulin-dependent protein kinase II alpha; Belongs to the protein kinase superfamily.
   
 0.745
camk2b
Calcium/calmodulin-dependent protein kinase (CaM kinase) II beta 2.
   
 0.745
fkbp1b
Peptidylprolyl isomerase.
   
 0.714
LOC111234733
Peptidylprolyl isomerase.
   
 0.714
LOC111235015
Peptidylprolyl isomerase.
   
 0.714
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.