STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111238351CKLF-like MARVEL transmembrane domain containing 3. (171 aa)    
Predicted Functional Partners:
cmtm4
CKLF-like MARVEL transmembrane domain containing 4.
      
 0.636
CKLF
Chemokine like factor.
      
0.634
cmtm7
CKLF-like MARVEL transmembrane domain containing 7.
      
 0.599
nsa2
NSA2 ribosome biogenesis homolog (S. cerevisiae).
      
 0.590
cmtm8
CKLF-like MARVEL transmembrane domain containing 8a.
      
 0.574
ENSSDUP00000028854
Uncharacterized protein.
      
 0.571
sf3b3
Splicing factor 3b, subunit 3.
      
 0.560
LOC111225982
Proline rich Gla (G-carboxyglutamic acid) 1.
      
 0.476
LOC111237530
RNA binding motif protein 46.
      
 0.468
Kynu
Kynureninase.
      
 0.465
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.