STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111237618Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1257 aa)    
Predicted Functional Partners:
LOC111236171
Notch receptor 1a.
   
0.977
ENSSDUP00000008124
ANK_REP_REGION domain-containing protein.
 
 
 0.965
LOC111225378
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
  
  
 
0.901
ENSSDUP00000025647
MNNL domain-containing protein.
     
 
0.900
notch1
Notch receptor 1b.
   
0.782
LOC111231549
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.520
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.520
LOC111217442
Notch receptor 3.
   
0.511
ENSSDUP00000008150
Uncharacterized protein.
   
0.506
ENSSDUP00000032734
Uncharacterized protein.
   
0.506
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.