STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111221460Signal transducer and activator of transcription. (818 aa)    
Predicted Functional Partners:
tyk2
Tyrosine-protein kinase.
   
 0.986
jak1
Tyrosine-protein kinase.
   
 0.983
stat1
Signal transducer and activator of transcription.
  
 
0.968
irf9
Interferon regulatory factor 9.
   
 0.948
LOC111218101
Signal transducer and activator of transcription.
  
  
 
0.908
jak3
Tyrosine-protein kinase.
   
 0.897
jak2
Tyrosine-protein kinase.
   
 0.878
LOC111236466
Tyrosine-protein kinase.
   
 0.878
pias4
Protein inhibitor of activated STAT, 4a.
   
 0.806
LOC111229253
CREB binding protein a.
    
 0.713
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.