STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bfsp2Beaded filament structural protein 2, phakinin; Belongs to the intermediate filament family. (436 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.796
LOC111224095
Crystallin, beta A1a; Belongs to the beta/gamma-crystallin family.
   
  
 0.571
LOC111218510
RAN binding protein 2.
   
 0.540
LOC111230708
Uncharacterized protein; Belongs to the beta/gamma-crystallin family.
   
 0.504
ENSSDUP00000008987
TROVE domain-containing protein.
   
 0.483
LOC111230690
Crystallin, beta B2; Belongs to the beta/gamma-crystallin family.
      
 0.480
crybb1
Crystallin, beta B1; Belongs to the beta/gamma-crystallin family.
   
 0.471
CRYBB3
Crystallin beta B3; Belongs to the beta/gamma-crystallin family.
   
 0.469
cryba4
Crystallin, beta A4; Belongs to the beta/gamma-crystallin family.
   
  
 0.462
rbbp5
Retinoblastoma binding protein 5.
    
 0.447
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.