STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111235000Tyrosine-protein kinase. (516 aa)    
Predicted Functional Partners:
LOC111226654
SH2 domain containing 1A duplicate b.
   
 0.625
grb2
Growth factor receptor-bound protein 2b.
   
0.618
matk
Tyrosine-protein kinase.
  
0.613
LOC111229549
Tyrosine-protein kinase.
  
0.610
CSK
Tyrosine-protein kinase.
  
0.607
pag1
Phosphoprotein membrane anchor with glycosphingolipid microdomains 1.
    
 0.606
nedd9
Neural precursor cell expressed, developmentally down-regulated 9.
   
 0.575
bcar1
BCAR1 scaffold protein, Cas family member.
   
 0.575
ENSSDUP00000032514
Lymphocyte cytosolic protein 2a.
   
 0.569
mst1r
Macrophage stimulating 1 receptor b.
    
0.568
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.