STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbxa2rThromboxane A2 receptor; Belongs to the G-protein coupled receptor 1 family. (373 aa)    
Predicted Functional Partners:
aamp
Angio-associated, migratory cell protein.
    
 0.911
LOC111232198
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.870
LOC111230822
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.870
LOC111230911
Uncharacterized protein.
    
 0.870
LOC111232216
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
    
 0.840
LOC111239870
Uncharacterized protein.
    
  0.707
LOC111239871
Guanine nucleotide binding protein (G protein), alpha 14.
    
  0.707
LOC111226150
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.645
LOC111223783
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.630
gng10
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.630
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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