STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSBPL1AOxysterol-binding protein; Belongs to the OSBP family. (967 aa)    
Predicted Functional Partners:
LOC111221715
Uncharacterized protein.
    
 0.734
LOC111221645
RAB7a, member RAS oncogene family.
    
 0.734
mospd2
Motile sperm domain containing 2.
    
 
 0.612
LOC111224134
Rab interacting lysosomal protein.
   
 0.568
LOC111230884
Uncharacterized protein.
   
 0.497
RILPL1
Rab interacting lysosomal protein like 1.
   
 0.497
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 
 0.419
LOC111233565
VAMP (vesicle-associated membrane protein)-associated protein B and C.
    
 
 0.419
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.