STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111221685G_PROTEIN_RECEP_F1_2 domain-containing protein. (350 aa)    
Predicted Functional Partners:
LOC111230843
Arginine vasopressin; Belongs to the vasopressin/oxytocin family.
   
 0.962
LOC111230848
Oxytocin; Belongs to the vasopressin/oxytocin family.
   
 0.702
edn1
Endothelin 1.
    
 0.555
ENSSDUP00000012342
Uncharacterized protein.
    
 0.518
gnal
Uncharacterized protein.
    
 0.458
LOC111236865
Uncharacterized protein.
    
 0.458
LOC111223941
GNAS complex locus.
    
 0.458
gnas
Uncharacterized protein.
    
 0.458
gnb4
Guanine nucleotide binding protein (G protein), beta polypeptide 4b.
    
 0.428
LOC111234326
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
 0.428
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.