STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
egfl7EGF-like-domain, multiple 7. (362 aa)    
Predicted Functional Partners:
spred1
Sprouty related EVH1 domain containing 1.
    
 
 0.546
fkbpl
FKBP prolyl isomerase like.
    
 0.477
ENSSDUP00000004365
Uncharacterized protein.
   
 0.469
egf
Epidermal growth factor.
    
 0.447
LOC111222294
Endothelial cell adhesion molecule a.
   
 
 0.439
LOC111237711
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
  
 0.424
LOC111224279
Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.
   
  
 0.424
mmrn2
Multimerin 2a.
   
 0.422
PCDH20
Protocadherin 20.
      
 0.422
fbxw2
F-box and WD repeat domain containing 2.
    
 0.421
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
Server load: low (20%) [HD]