STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMD5Sterile alpha motif domain containing 5. (201 aa)    
Predicted Functional Partners:
LOC111225549
SAM and SH3 domain containing 1b.
 
    
0.791
sash1
SAM and SH3 domain containing 1a.
 
    
0.775
ENSSDUP00000027601
SAM domain, SH3 domain and nuclear localisation signals 1b.
 
      0.437
shc1
SHC (Src homology 2 domain containing) transforming protein 1.
    
 0.433
SAMD14
Sterile alpha motif domain containing 14.
      
 0.433
SHC3
SHC adaptor protein 3.
    
 0.433
SHC4
SHC adaptor protein 4.
    
 0.433
adgb
Androglobin; Belongs to the peptidase C2 family.
      
 0.420
LOC111234925
Sterile alpha motif domain containing 10a.
      
 0.416
Your Current Organism:
Seriola dumerili
NCBI taxonomy Id: 41447
Other names: S. dumerili, greater amberjack
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.